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Tuesday, May 20

Session 227: Bacterial Methylomes
Convener: Sir Rich Roberts
Meeting Room 156A

2:00 pm - 2:30 pm
  • 100+ Methylomes from Diverse Bacteria
    Matthew Blow; Joint Genome Inst., Walnut Creek, CA
2:30 pm – 2:45 pm​
  • Characterizing Bacterial Methylomes from Heterogeneous Samples at Single Molecule Resolution
    G. Fang, J. Beaulaurier, S. Zhu
    ​Icahn Sch. of Med. at Mount Sinai, New York, NY
2:45 pm – 3:00 pm
  • An Integrative Network Approach to Investigate Methylation-mediated Control of Gene Expression in Bacteria
    S. Zhu, G. Fang; Inst. for Genomics and Multi-scale Biology, Mount Sinai Sch. of Med., New York, NY
3:00 pm – 3:30 pm
  • Methylation in Salmonella Strains
    Maria Hoffman; FDA/CFSAN/DM, College Park, MD.
3:30 pm – 3:45 pm 
  • Strain-Based Differences in DNA Methyltransferase Activities in Mycobacterium tuberculosis
    S. S. Shell1, A. Fomenkov2, M. R. Chase1, R. J. Roberts2, S. M. Fortune1; 1Harvard Sch. of Publ. Hlth., Boston, MA, 2New England Biolabs, Ipswich, MA 
4:00 pm – 4:30 pm
  • New Type IIG Restriction Enzymes Discovered by PacBio Sequencing
    Richard Morgan; New England Biolabs, Ipswich, MA.

Sunday May 18
10:45 am - 12:00 pm

  • 54: SMRT Sequencing of Campylobacter jejuni subsp. jejuni IA3902 Reveals Unique Methylome Profile
    • K. T. Mou et al.  Iowa State University
  • 65: Comparative Methylome Analysis of Extraintestinal Pathogenic Escherichia coli Strains Causing Urinary Tract Infection in Humans with those Causing Fatal Pneumonia in Animals
    • C. DebRoy et al. Pennsylvania State University  
  • 74: A Whole-genome View of the Association of Meningococcal Lineages with the Age of Meningococcal Disease Patients
    • D. M. C. Hill et al. University of Oxford
  • 130: Resolution of Discrepant cobas CT/NG Test Result with Next Generation Sequencing
    • S. C. Hibbard et al. Roche Molecular Diagnostics
  • 440: An Interactive Workflow For The Analysis Of Contigs From The Metagenomic Shotgun Assembly Of SMRT® Sequencing Data
    • R. J. Hall et al. Pacific Biosciences
12:30 pm – 1:45 pm
  • 976: Base J Synthesis and Function in Leishmania
    • P. J. Myler et al.  Seattle Biomedical Research Institute 

Monday, May 19
10:45 am – 12:00 pm

  • 982: Whole Genome Assembly Of A Klebsiella Pneumoniae Strain Co-Producing NDM-1 And OXA-232 Carbapenemases Using Single-Molecule, Long-Read Sequencing
    • Y. Doi et al.  University of Pittsburgh School of Medicine

Tuesday , May 20
10:45 am - 12:00 pm

  • 2145: New Discoveries in Salmonella Genome Closure
    • T. Muruvanda et al. FDA-CFSAN
  • 2157: Comparison of Genome Sequencing Technology and Assembly Software for the Analysis of a GC-Rich Bacterial Genome
    • D. Scott et al. Univ. of South Carolina
  • 2335: Accurately Surveying Uncultured Microbial Species with SMRT® Sequencing
    • B. Bowman et al. Pacific Biosciences
12:30 pm – 1:45 pm
  • 2632: SMRT® Sequencing and Assembly of the Human Microbiome Project Mock Community Sample - a Feasibility Project
    • M. Ashby et al. Pacific Biosciences
  • 2718: Bacteriophages in Etosha National Park, Namibia
    • H. H. Ganz  et al. University of California, Davis
  • 2875: Genomes of Two Haloalkaliphilic Metal-reducing Bacteria in the Context of the Geobacteraceae Pangenome
    • J. P. Badalamenti et al. Univ. of Minnesota 

Program Presentations

Posters
Exhibit Hall B
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Session 235. The Path to Next Generation Sequencing for Infectious Disease Testing
Meeting Room 257A

4:00 pm - 4:30 pm 

  • Tracking Hospital Patients and Environment with Complete Genome Sequencing of Carbapenem-Resistant Klebsiella pneumoniae and other Enterobacteriaceae
    Julia Segre; NIH, Bethesda, MD

Enter to Win!

Submit your entry to the SMRTest Microbe Grant Program by June 15 to win a PacBio sequencing  run of your microbe.